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Protocols

RNAProSite specifications

Information


Unique identifier OMICS_12225
Name RNAProSite
Interface Web user interface
Restrictions to use None
Input data PDB code and chain ID or PDB file and chain ID
Computer skills Basic
Stability No
Maintained No

Documentation


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Publication for RNAProSite

RNAProSite citation

call_split

A Large Scale Assessment of Nucleic Acids Binding Site Prediction Programs

2015
PLoS Comput Biol
PMCID: 4683125
PMID: 26681179
DOI: 10.1371/journal.pcbi.1004639
call_split See protocol

[…] Li lab and Xiaoyong Pan provided RNAProSite and xypan prediction results respectively, with default parameter. aaRNA was used by inputting the structure file with default parameters. RNABindR and RNABindRPlus were predicted with defa […]


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RNAProSite institution(s)
State Key Laboratory of Bioreactor Engineering, Shanghai Key Laboratory of New Drug Design, School of Pharmacy, East China University of Science and Technology, Shanghai, China
RNAProSite funding source(s)
The 863 Hi-Tech Program of China (grant 2012AA020308); the National Natural Science Foundation of China (grants 81222046 and 81230076); Special Program for Applied Research on Super Computation of the NSFC-Guangdong Joint Fund (the second phase); the Fundamental Research Funds for the Central Universities; the Innovation Program of Shanghai Municipal Education Commission (grant 13SG32); Fok Ying Tung Education Foundation (141035)

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