RNAseqViewer statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

RNAseqViewer specifications


Unique identifier OMICS_01363
Name RNAseqViewer
Software type Application/Script
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Input format SAM/BAM,BED,GTF,FASTA,RefFlat,Wiggle
Operating system Unix/Linux
Programming languages Python
Computer skills Medium
Maintained Yes


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Publication for RNAseqViewer

RNAseqViewer in publications

PMCID: 5605993
PMID: 28979763
DOI: 10.5256/f1000research.10524.r22368

[…] out there, not sure if you would need to change the name (if so please no horrible backronyms):, https://www.ncbi.nlm.nih.gov/pmc/articles/pmc5320319/, http://bioinfo.au.tsinghua.edu.cn/software/rnaseqviewer/, i have read this submission. i believe that i have an appropriate level of expertise to confirm that it is of an acceptable scientific standard., competing interests: no competing […]

PMCID: 4728800
PMID: 26813401
DOI: 10.1186/s13059-016-0881-8

[…] genomics viewer (igv) [] (figure s1a in additional file ), genome maps [], or savant []. some visualization tools are specifically designed for visualizing multiple rna-seq samples, such as rnaseqviewer [], which provides flexible ways to display the read abundances on exons, transcripts and junctions. introns can be hidden to better display signals on the exons, and the heatmaps […]

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RNAseqViewer institution(s)
MOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic and Systems Biology, TNLIST/Department of Automation and School of Life Sciences, Tsinghua University, Beijing, China
RNAseqViewer funding source(s)
Supported in part by the National Basic Research Program of China (2012CB316504), the Hi-tech Research and Development Program of China (2012AA020401) and NSFC grant 91010016.

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