RNAseqViewer statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Transcriptome visualization chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

RNAseqViewer specifications

Information


Unique identifier OMICS_01363
Name RNAseqViewer
Software type Application/Script
Interface Graphical user interface
Restrictions to use Academic or non-commercial use
Input format SAM/BAM,BED,GTF,FASTA,RefFlat,Wiggle
Operating system Unix/Linux
Programming languages Python
Computer skills Medium
Maintained Yes

Versioning


Add your version

Publication for RNAseqViewer

RNAseqViewer in publications

 (2)
PMCID: 5605993
PMID: 28979763
DOI: 10.5256/f1000research.10524.r22368

[…] out there, not sure if you would need to change the name (if so please no horrible backronyms):, https://www.ncbi.nlm.nih.gov/pmc/articles/pmc5320319/, http://bioinfo.au.tsinghua.edu.cn/software/rnaseqviewer/, i have read this submission. i believe that i have an appropriate level of expertise to confirm that it is of an acceptable scientific standard., competing interests: no competing […]

PMCID: 4728800
PMID: 26813401
DOI: 10.1186/s13059-016-0881-8

[…] genomics viewer (igv) [] (figure s1a in additional file ), genome maps [], or savant []. some visualization tools are specifically designed for visualizing multiple rna-seq samples, such as rnaseqviewer [], which provides flexible ways to display the read abundances on exons, transcripts and junctions. introns can be hidden to better display signals on the exons, and the heatmaps […]


To access a full list of publications, you will need to upgrade to our premium service.

RNAseqViewer institution(s)
MOE Key Laboratory of Bioinformatics, Bioinformatics Division and Center for Synthetic and Systems Biology, TNLIST/Department of Automation and School of Life Sciences, Tsinghua University, Beijing, China
RNAseqViewer funding source(s)
Supported in part by the National Basic Research Program of China (2012CB316504), the Hi-tech Research and Development Program of China (2012AA020401) and NSFC grant 91010016.

RNAseqViewer reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review RNAseqViewer