RNAstructure specifications

Unique identifier:
OMICS_03455
Interface:
Command line interface, Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
License:
GNU General Public License version 3.0
Version:
5.8.1
Registration required:
Yes

Subtools

  • Dynalign
  • Dynalign II
  • AccessFold
  • AllSub
  • bifold
  • bipartition
  • CircleCompare
  • ct2dot
  • dot2ct Draw
  • DuplexFold
  • efn2
  • EnsembleEnergy
  • Fold
  • MaxExpect
  • Multilign
  • oligoscreen OligoWalk
  • partition
  • PARTS
  • ProbablePair
  • ProbKnot
  • RemovePseudoknots
  • scorer
  • stochastic TurboFold

versioning

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No versioning.

RNAstructure distribution

download

RNAstructure specifications

Unique identifier:
OMICS_03455
Restrictions to use:
None
Computer skills:
Basic
Interface:
Web user interface
Input format:
FASTA
Stability:
Stable

Subtools

  • Dynalign
  • Dynalign II
  • AccessFold
  • AllSub
  • bifold
  • bipartition
  • CircleCompare
  • ct2dot
  • dot2ct Draw
  • DuplexFold
  • efn2
  • EnsembleEnergy
  • Fold
  • MaxExpect
  • Multilign
  • oligoscreen OligoWalk
  • partition
  • PARTS
  • ProbablePair
  • ProbKnot
  • RemovePseudoknots
  • scorer
  • stochastic TurboFold

RNAstructure support

Maintainer

  • David H. Mathews <>
This tool is not maintained anymore.

Additional information

http://rna.urmc.rochester.edu/RNAstructureHelp.html http://rna.urmc.rochester.edu/RNAstructureWeb/Information/Help.html

forum

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forum

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Credits

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Publications

Institution(s)

Department of Biochemistry and Biophysics, University of Rochester Medical Center, Rochester, NY, USA; Center for RNA Biology, University of Rochester Medical Center, Rochester, NY, USA; Department of Biostatistics and Computational Biology, University of Rochester Medical Center, Rochester, NY, USA

Funding source(s)

Supported by National Institutes of Health (NIH) [R01 GM076485].

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