RNAstructure specifications

Information


Unique identifier OMICS_03455
Name RNAstructure
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
License GNU General Public License version 3.0
Computer skills Advanced
Version 5.8.1
Stability Stable
Registration required Yes
Maintained Yes

Subtools


  • Dynalign II
  • AccessFold
  • AllSub
  • bifold
  • bipartition
  • CircleCompare
  • ct2dot
  • dot2ct Draw
  • DuplexFold
  • efn2
  • EnsembleEnergy
  • Fold
  • oligoscreen OligoWalk
  • partition
  • PARTS
  • ProbablePair
  • RemovePseudoknots
  • stochastic TurboFold
  • CycleFold, TurboKnot

Download


Versioning


Add your version

Maintainer


  • person_outline David H. Mathews <>

Additional information


http://rna.urmc.rochester.edu/RNAstructureHelp.html http://rna.urmc.rochester.edu/RNAstructureWeb/Information/Help.html

Information


Unique identifier OMICS_03455
Name RNAstructure
Interface Web user interface
Restrictions to use None
Input format FASTA
Computer skills Basic
Stability Stable

Subtools


  • Dynalign II
  • AccessFold
  • AllSub
  • bifold
  • bipartition
  • CircleCompare
  • ct2dot
  • dot2ct Draw
  • DuplexFold
  • efn2
  • EnsembleEnergy
  • Fold
  • oligoscreen OligoWalk
  • partition
  • PARTS
  • ProbablePair
  • RemovePseudoknots
  • stochastic TurboFold
  • CycleFold, TurboKnot

Maintainer


This tool is not maintained anymore.

Additional information


http://rna.urmc.rochester.edu/RNAstructureHelp.html http://rna.urmc.rochester.edu/RNAstructureWeb/Information/Help.html

Publications for RNAstructure

RNAstructure institution(s)
Department of Biochemistry and Biophysics, University of Rochester Medical Center, Rochester, NY, USA; Center for RNA Biology, University of Rochester Medical Center, Rochester, NY, USA; Department of Biostatistics and Computational Biology, University of Rochester Medical Center, Rochester, NY, USA
RNAstructure funding source(s)
Supported by National Institutes of Health (NIH) [R01 GM076485].

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