RNAup pipeline

RNAup specifications


Unique identifier OMICS_09346
Name RNAup
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 2.1.9
Stability Stable
Maintained Yes


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  • person_outline RNAinverse <>

Publication for RNAup

RNAup citation

PMCID: 3063221

[…] the joint probability that two intervals are accessible, this is no way around sampling the structures of the molecules., the first predecessor of our algorithm, not yet fully (n3), has been used in rnaup [5]. the rnaplfold program of the viennarna package [12] originally used the algorithm introduced in [10], but has been rewritten to use the efficient version of the algorithm presented below., […]

RNAup institution(s)
Institute for Theoretical Chemistry, University of Vienna, Vienna, Austria

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