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RnBeads

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An R package for comprehensive analysis of DNA methylation data obtained with any experimental protocol that provides single-CpG resolution, including Infinium 450K microarray and bisulfite sequencing protocols, but also MeDIP-seq and MBD-seq.

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RnBeads versioning

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RnBeads classification

RnBeads specifications

Software type:
Package/Module
Restrictions to use:
None
Programming languages:
R
Stability:
Stable
Galaxy:
https://toolshed.g2.bx.psu.edu/repository?repository_id=e9e57142d30f1062
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Advanced
Maintained:
Yes

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Publications

Institution(s)

Max Planck Institute for Informatics, Saarbrücken, Germany; Department of Genetics/Epigenetics, Saarland University, Saarbrücken, Germany; CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria

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