Robetta specifications

Information


Unique identifier OMICS_03868
Interface Web user interface
Restrictions to use Academic or non-commercial use
Computer skills Basic
Stability Beta
Maintained Yes

Maintainer


  • person_outline David Baker <>

Robetta article

Robetta citations

 (3)
2017
PMCID: 5405553

[…] the nucleotide of interest was at a position for easy read during sanger sequencing. amplification and sequencing was performed by eurofins genomics india pvt. ltd., ab-initio models were made using robetta server [27] (http://robetta.bakerlab.org) except for rpsl (homology modeling was used) and the models generated were checked for various parameters for model assessment, such as ramachandran […]

2013
PMCID: 3607185

[…] share the similar dna/rna-binding sequence [e/s] g[q/r][g/s]rggq as c7m9t8 and q9x8u3 (figure 1d). in addition, by the domain prediction protocol ginzu in de novo 3d modeling server robetta (http://robetta.bakerlab.org/), we found that emb564 contains a domain homologous with the domain involved in branched dna processing in atpdependent rna helicase (q8tzh8; pdb: 1wp9-a) from pyrococcus […]

2011
PMCID: 3372294

[…] motif. hhpred searches matched a number of drbps to the crv protein and jpred predicted an α-β-β-β-α fold that is standard in all drbps. perhaps the most conclusive evidence is the fact that robetta successfully modeled the crv-zwe-157 amino acid sequence onto the structure of known drbps placing the few highly conserved amino acids in the correct location for interactions with dsrna. […]

Robetta institution(s)
Structural Genomics of Pathogenic Protozoa, Department of Biochemistry, University of Washington, Seattle WA, USA
Robetta funding source(s)
Supported by NIH grant No. P50 GM64655 and the Howard Hughes Medical Institute.

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