rRNAFilter specifications


Unique identifier OMICS_12826
Name rRNAFilter
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Input data rRNA reads from metatranscriptomic data
Input format FASTA
Output data Two files which contain rRNA reads and non-rRNA reads separately.
Operating system Unix/Linux, Windows
Programming languages Java
Computer skills Advanced
Version 1.1
Stability Stable
Maintained Yes



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  • person_outline Xiaoman Li <>

Publication for rRNAFilter

rRNAFilter institution(s)
Department of Computer Science, University of Central Florida, Orlando, FL, USA; Burnett school of Biomedical Science, College of Medicine, University of Central Florida, Orlando, FL, USA
rRNAFilter funding source(s)
This work has been supported by the National Science Foundation [Grant Nos. 1356524, 1149955, and 1218275] and the National Institutes of Health [Grant No. 2R01HL048044].

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