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RSBML specifications

Information


Unique identifier OMICS_21541
Name RSBML
Software type Framework/Library, Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License Artistic License version 2.0, GNU General Public License version 2.0
Computer skills Advanced
Version 2.38.0
Stability Stable
Requirements
methods, BiocGenerics, utils, R(>=2.6.0), graph, BiocGenerics(>=0.3.2)
Maintained Yes

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Documentation


Additional information


https://cran.r-project.org/src/contrib/Archive/rsbml/

RSBML citation

library_books

R Based Software for the Integration of Pathway Data into Bioinformatic Algorithms

2014
PMCID: 4009765
PMID: 24833336
DOI: 10.3390/biology3010085

[…] package and also features a download function, which is able to automatically retrieve kegg pathways via the web. the sbmlr package [] parses sbml up to level 2 using the r xml package. the package rsbml uses the system library libsbml [] to parse, validate and convert sbml data to r graphs, objects and currently supports sbml up to level 3. the package psicquic [] retrieves interactions […]


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