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rSNPs MAPPER | Large-scale computational identification of regulatory SNPs with rSNP-MAPPER

A powerful tool for the large-scale analysis of regulatory SNPs. Its main purpose is to evaluate the potential effect of a SNP on predicted transcription factor binding sites, by measuring the change in the predictive score of the transcription factor binding site (TFBS) as a consequence of the allele change. rSNP-MAPPER is optimized for large scale work, allowing for the efficient annotation of thousands of SNPs, and is designed to assist in the genome-wide investigation of transcriptional regulatory networks, prioritizing potential rSNPs for subsequent experimental validation.

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rSNPs MAPPER classification

rSNPs MAPPER specifications

Unique identifier:
OMICS_01931
Restrictions to use:
None
Stability:
Stable
Interface:
Web user interface
Computer skills:
Basic
Maintained:
No

rSNPs MAPPER support

Maintainer

This tool is not available anymore.

Credits

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Publications

Institution(s)

Department of Molecular Genetics and Microbiology, University of Florida, Gainesville, USA; University of Florida Genetics Institute, University of Florida, Gainesville, USA

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