- Unique identifier:
- Restrictions to use:
- Academic or non-commercial use
- Input format:
- MODELLER PIR,FASTA,PDB,ZIP,TAR.GZ
- Computer skills:
- Web user interface
- Input data:
- Some protein sequences and/or structures.
- Output data:
- The final alignment file, superimposed coordinates if structures were aligned, a dendrogram file if a tree was constructed, and the MODELLER input and log files.
- Andrej Sali <>
- Mallur Srivatsan Madhusudhan <>
SALIGN is also part of DBAli https://salilab.org/DBAli/?page=tools&action=f_salign http://modbase.compbio.ucsf.edu/salign/help.cgi?type=help
No open topic.
(Braberg et al., 2012)
SALIGN: a web server for alignment of multiple protein sequences and structures.
PMID: 22618536 DOI: 10.1093/bioinformatics/bts302
(Marti-Renom et al., 2007)
DBAli tools: mining the protein structure space.
Nucleic Acids Res.
PMID: 17478513 DOI: 10.1093/nar/gkm236
Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA, USA; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA; Department of Pharmaceutical Chemistry, and California Institute of Quantitative Biosciences (QB3), University of California, San Francisco, CA, USA; Bioinformatics Institute, Singapore; Department of Biological Sciences, National University of Singapore, Singapore; School of Biological Sciences, Nanyang Technological University, Singapore
Supported by National Institutes of Health (NIH), U.S.A [U54 GM094662 and R01 GM54762].
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