SALIGN specifications

Unique identifier:
OMICS_03674
Restrictions to use:
Academic or non-commercial use
Input format:
MODELLER PIR,FASTA,PDB,ZIP,TAR.GZ
Computer skills:
Basic
Maintained:
Yes
Interface:
Web user interface
Input data:
Some protein sequences and/or structures.
Output data:
The final alignment file, superimposed coordinates if structures were aligned, a dendrogram file if a tree was constructed, and the MODELLER input and log files.
Stability:
Stable

SALIGN support

Maintainers

  • Andrej Sali <>
  • Mallur Srivatsan Madhusudhan <>

Additional information

SALIGN is also part of DBAli https://salilab.org/DBAli/?page=tools&action=f_salign http://modbase.compbio.ucsf.edu/salign/help.cgi?type=help

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Publications

Institution(s)

Department of Cellular and Molecular Pharmacology, University of California, San Francisco, CA, USA; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA, USA; Department of Pharmaceutical Chemistry, and California Institute of Quantitative Biosciences (QB3), University of California, San Francisco, CA, USA; Bioinformatics Institute, Singapore; Department of Biological Sciences, National University of Singapore, Singapore; School of Biological Sciences, Nanyang Technological University, Singapore

Funding source(s)

Supported by National Institutes of Health (NIH), U.S.A [U54 GM094662 and R01 GM54762].

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