SalmonTE specifications

Information


Unique identifier OMICS_25089
Name SalmonTE
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data Some cDNA sequences.
Input format FASTQ
Output data A statistical report and a box plot.
Output format TSV,XML,XLS,XLSX,Rdata,PDF
Operating system Unix/Linux
Programming languages Python, R
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Zhandong Liu <>

Publication for SalmonTE

SalmonTE institution(s)
Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA; Jan and Dan Duncan Neurological Research Institute, Texas Childrens Hospital, Houston, TX, USA; Department of Neuroscience, Baylor College of Medicine, Houston, TX, USA; Department of Neurology, Baylor College of Medicine, Houston, TX, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA
SalmonTE funding source(s)
Supported by National Institute of General Medical Sciences R01- GM120033, National Science Foundation - Division of Mathematical Sciences DMS-1263932, Cancer Prevention Research Institute of Texas RP170387, Houston Endowment, and the Alzheimer’s Association.

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