Samifier specifications

Unique identifier:
OMICS_24434
Interface:
Command line interface
Input data:
A genomic sequence, the genome coordinates for all genes, the results from the MS/MS ions search results and an accession number mapping file.
Output format:
SAM+BED
Programming languages:
Java
Computer skills:
Advanced
Stability:
Stable
Software type:
Application/Script
Restrictions to use:
None
Input format:
FASTA+GFF3+DAT
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Version:
1.0.9+
Maintained:
Yes

versioning

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Samifier distribution

download

Samifier support

Documentation

Maintainer

  • Marc Wilkins <>

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Credits

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Publications

Institution(s)

Systems Biology Initiative, The University of New South Wales, Sydney, NSW, Australia; School of Biotechnology and Biomolecular Sciences, The University of New South Wales, Sydney, NSW, Australia; Intersect Australia Limited, Sydney, NSW, Australia; Endocrine Research Laboratory (KMEB), Department of Endocrinology and Metabolism, Odense University Hospital & University of Southern Denmark, Odense, Denmark

Funding source(s)

Supported by the Australian National Data Service (ANDS), the New South Wales State Government Science Leveraging Fund, the EIF Super Science scheme, the University of New South Wales and the Australian Research Council.

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