sampleDrift specifications

Information


Unique identifier OMICS_23151
Name sampleDrift
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 0.1.001
Stability Stable
Maintained Yes

Download


download.png
download.png
download.png
download.png

Versioning


No version available

Maintainer


  • person_outline Carl Brunius

Publication for sampleDrift

sampleDrift citation

call_split

Prediction and modeling of pre analytical sampling errors as a strategy to improve plasma NMR metabolomics data

2017
Bioinformatics
PMCID: 5870544
PMID: 29036400
DOI: 10.1093/bioinformatics/btx442
call_split See protocol

[…] ng pre-centrifugation delay and multivariate statistical modeling were performed in the open source statistical environment R v 3.2.0 (). Algorithms, data and workflow are available in the R package ‘sampleDrift’ at https://gitlab.com/CarlBrunius/sampleDrift. Predictive modeling for biomarker discovery of pre-analytical sample management was performed using an in-house R package ‘MUVR’, which is a […]

sampleDrift institution(s)
Department of Biology and Biological Engineering, Chalmers University of Technology, Gothenburg, Sweden; Department of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden; Swedish NMR Centre, University of Gothenburg, Gothenburg, Sweden; Department of Laboratory Medicine, Karolinska Institutet, Stockholm, Sweden; Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden; Institute of Environmental Medicine, Karolinska Institutet, Stockholm, Sweden
sampleDrift funding source(s)
Supported by the Swedish Research Council [829-2009-6285] and the European Union Framework Programme 7 [contract 313010] through grants, respectively, and by the Swedish Research Council [2011-2804], the Swedish Research Council Formas [2011-520], the Swedish University of Agricultural Sciences and Chalmers University of Technology through grants.

sampleDrift reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review sampleDrift