SAMtools tview protocols

SAMtools tview specifications


Unique identifier OMICS_00893
Name SAMtools tview
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Medium
Stability Stable
Maintained Yes


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Publication for SAMtools tview

SAMtools tview IN pipeline

PMCID: 4170574
PMID: 25230663
DOI: 10.1038/nature13673

[…] (gq) of ≥30, and snp quality (qual) of ≥50. for motala12, which is of lower coverage, we included sites having at least 2× coverage and that passed visual inspection of the local alignment using samtools tview (, the human origins array consists of 14 panels of snps for which the ascertainment is well known8,61. all population genetics analysis were carried […]

SAMtools tview institution(s)
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, UK; Broad Institute of MIT and Harvard, Cambridge, MA, USA; Beijing Institute of Genomics, Chinese Academy of Science, Beijing, China; Department of Computer Science, University of California Los Angeles, Los Angeles, CA, USA; Department of Biology, Boston College, Chestnut Hill, MA; Center for Statistical Genetics, Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA

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