Sanger sequencing software tools

Sanger sequencing steps

Since its development in the late 1970s, Sanger chain-termination DNA sequencing (Sanger et al., 1977) has become a widely used, essential technique of molecular biology. Although high-coverage, high-volume sequencing has largely moved to “next-generation”…

Sanger sequencing software tools

Most Recent Tools

Indigo
Desktop
Web

Indigo Indigo

Discovers mutations generated by genome editing tools such as CRISPR/Cas9, ZNFs…

Discovers mutations generated by genome editing tools such as CRISPR/Cas9, ZNFs or TALENs. Indigo is a rapid single nucleotide polymorphism (SNP) & Insertion-Deletion (InDel) discovery method in…

abiview
Desktop

abiview

Displays the trace in an ABI sequencer file. abiview is an Emboss tool that…

Displays the trace in an ABI sequencer file. abiview is an Emboss tool that reads in an ABI sequencer trace file and graphically displays the data. The probabilities of each of the 4 nucleotide bases…

sangerseqR
Desktop

sangerseqR

Contains several tools for analyzing Sanger Sequencing data files in R,…

Contains several tools for analyzing Sanger Sequencing data files in R, including reading .scf and .ab1 files, making basecalls and plotting chromatograms. sangerseqR offers functions to generate a…

VarDetect
Desktop

VarDetect

Detects single nucleotide polymorphisms (SNPs) efficiently from fluorescence…

Detects single nucleotide polymorphisms (SNPs) efficiently from fluorescence based chromatogram data and interprets fluorescence based chromatograms and efficiently detect the corresponding…

Most Popular Tools

G T A T C G C T A
Celera…
Desktop

Celera assembler

A de novo whole-genome shotgun (WGS) DNA sequence assembler.

A de novo whole-genome shotgun (WGS) DNA sequence assembler.

Curators for Sanger sequencing

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