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Sanger sequencing software tools

Since its development in the late 1970s, Sanger chain-termination DNA sequencing (Sanger et al., 1977) has become a widely used, essential technique of molecular biology. Although high-coverage, high-volume sequencing has largely moved to “next-generation”…

Sanger sequencing steps

Experts in Sanger sequencing

They share and annotate bioinformatics tools

Most recent bioinformatics tools

HiTRACE
Web

HiTRACE High-Throughput Robust Analysis for Capillary Electrophoresis

Employs a series of automated techniques to control the high level of…

Employs a series of automated techniques to control the high level of variability in parameters of capillary electrophoresis (CE) systems. HiTRACE resolves a key alignment bottleneck of modern…

EditR
Desktop

EditR Edit Deconvolution by Inference of Traces in R

Measures base editing efficiency. EditR can produce a graphic of the percent…

Measures base editing efficiency. EditR can produce a graphic of the percent noise across the sequencing file to assess the sequencing quality. It requires only a single Sanger sequencing file of a…

Fragment…
Web

Fragment Analysis for CE instrument

Provides automatic quantitative fragment analysis for the output data from…

Provides automatic quantitative fragment analysis for the output data from Capillary Electrophoresis (CE). Fragment Analysis for CE instrument is a web platform that offers analysis (including…

Cutepeaks
Desktop

Cutepeaks

Provides a simple viewer for Sanger trace file made with Qt5. Cutepeaks…

Provides a simple viewer for Sanger trace file made with Qt5. Cutepeaks supports AB1 and SCF 3.0 file formats.

Most popular analytical software

G T A T C G C T A
Celera…
Desktop

Celera assembler

Identifies allelic variation given a Whole Genome Shotgun (WGS) assembly of…

Identifies allelic variation given a Whole Genome Shotgun (WGS) assembly of haploid sequences. Celera assembler is an algorithm to produce a set of haploid consensus sequences rather than a single…

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