Protocols

SASD specifications

Information


Unique identifier OMICS_20373
Name SASD
Alternative name Synthetic Alternative Splicing Database
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained No

Maintainers


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Publication for Synthetic Alternative Splicing Database

SASD citation

call_split

Cross linking mass spectrometry identifies new interfaces of Augmin required to localise the γ tubulin ring complex to the mitotic spindle

2017
PMCID: 5450317
PMID: 28351835
DOI: 10.1242/bio.022905
call_split See protocol

[…] uch distance vectors can penetrate the surface of the protein, Xwalk also computes the shortest path between the two cross-linked lysines by following the solvent accessible protein surface distance (SASD).Potential of Augmin subunits to be disordered was assessed by two algorithms: DISOPRED2 () and PrDOS (). PrDOS judges disorder by local amino acid sequence (sliding window), using support vector […]

SASD institution(s)
Department of Academic and Institutional Resources and Technology, University of North Texas Health Science Center, Fort Worth, TX, USA; Department of Forensic and Investigative Genetics, University of North Texas Health Science Center, Fort Worth, TX, USA

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