ScaffMatch statistics

info info

Citations per year

Number of citations per year for the bioinformatics software tool ScaffMatch

Tool usage distribution map

info info

Associated diseases


Popular tool citations

chevron_left Assembly scaffolding chevron_right
Want to access the full stats & trends on this tool?


ScaffMatch specifications


Unique identifier OMICS_08198
Name ScaffMatch
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Version 0.9
Stability Stable
Maintained Yes


No version available


Publication for ScaffMatch

ScaffMatch citation


Single molecule sequencing guided scaffolding and correction of draft assemblies

BMC Genomics
PMCID: 5731603
PMID: 29244003
DOI: 10.1186/s12864-017-4271-8
call_split See protocol

[…] problem that is NP-hard, but no complexity analysis was given for the scaffolding problem. Here, we show that this scaffolding problem is indeed NP-hard. We also prove that the algorithm presented in ScaffMatch [] is a 2-approximation of an optimal scaffolding using our independent formulation of this model. […]

Want to access the full list of citations?
ScaffMatch institution(s)
Department of Computer Science, Georgia State University, Atlanta, GA, USA

ScaffMatch reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review ScaffMatch