ScaffoldSelection specifications


Unique identifier OMICS_14373
Name ScaffoldSelection
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
Computer skills Advanced
Version 1.2.0
Stability Stable
Source code URL
Maintained Yes




No version available


  • person_outline Birte Höcker

Publication for ScaffoldSelection

ScaffoldSelection citation


Use of an Improved Matching Algorithm to Select Scaffolds for Enzyme Design Based on a Complex Active Site Model

PLoS One
PMCID: 4887040
PMID: 27243223
DOI: 10.1371/journal.pone.0156559

[…] struct metal-binding sites for rational design of nascent metalloenzymes [, ]. Other newly developed programs for matching active sites onto protein scaffolds include vector matching [], OptGraft [], ScaffoldSelection [], ProdaMatch [], AutoMatch [], and Saber []. However, the actual effectiveness of these programs to generate de novo enzymes has not been confirmed by experimental validation [–].A […]

ScaffoldSelection institution(s)
Max Planck Institute for Developmental Biology, Tübingen, Germany; Center for Bioinformatics, Quantitative Biology Center, and Department of Computer Science, University of Tübingen, Tübingen, Germany

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