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  3. Genome annotation
  4. Repetitive DNA
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A graphical interface cloud computing solution that does not require a parallel computing environment or extensive technical experience. This customizable and modular system performs read mapping, read cleaning, and variant calling and annotation. We provide this open-access and open-source resource as a user-friendly interface in Amazon EC2.

Software type:
Framework
Interface:
Command line interface
Restrictions to use:
None
Operating system:
Unix/Linux
Parallelization:
MapReduce
Computer skills:
Advanced
Stability:
Stable
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  • (Karczewski et al., 2014) STORMSeq: an open-source, user-friendly pipeline for processing personal genomics data in the cloud. PloS one.
    PMID: 24454756

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