ScatterJn specifications


Unique identifier OMICS_16518
Name ScatterJn
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data One or more image(s).
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0
Stability Stable
ImageJ or Fiji
Maintained Yes



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  • person_outline Fabian Zeitvogel <>

Publication for ScatterJn

ScatterJn in publication

PMCID: 5519370
PMID: 28578314
DOI: 10.1074/jbc.M117.792374

[…] czi images were exported to tiff file format using zen (blue edition version 2.3, carl zeiss microscopy gmbh, 2011) and analyzed using imagej fiji package (). co-localization was assessed using the scatterjn plugin and scatter plots (, ). the scatterplots show two-dimensional histograms of two channels at the same spatial region. data points are generated as n(x,y), where n is the number […]

ScatterJn institution(s)
Center for Applied Geosciences, University of Tuebingen, Tuebingen, Germany; Bayreuth Center of Ecology and Environmental Research, Bayreuth University, Bayreuth, Germany
ScatterJn funding source(s)
This work was funded by DFG Emmy-Noether program (OB 362/1-1).

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