SCDE specifications

Information


Unique identifier OMICS_04213
Name SCDE
Alternative name Single-Cell Differential Expression
Software type Package/Module
Interface Command line interface, Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

Subtool


  • PAGODA

Versioning


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Publications for Single-Cell Differential Expression

SCDE institution(s)
Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA; Illumina Inc., San Diego, CA, USA; Department of Bioengineering, University of California, San Diego, CA, USA; Department of Molecular and Cellular Neuroscience, Dorris Neuroscience Center, The Scripps Research Institute, La Jolla, CA, USA; Harvard Stem Cell Institute, Cambridge, MA, USA
SCDE funding source(s)
Supported by the Ellison Medical Foundation award, US National Science Foundation (NSF) CAREER award (NSF-14-532), NSF Graduate Research Fellowship (DGE1144152), US National Institutes of Health (NIH) grants U01 MH098977, NIH R01 NS084398 and NIH T32 AG00216.

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