SCeQTL specifications

Information


Unique identifier OMICS_33311
Name SCeQTL
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data A gene expression matrix and an SNV matrix.
Output data The P or q value of gene-SNV pairs.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 2.0
Computer skills Advanced
Version 0.1.0
Stability Stable
Requirements
qvalue, ggplot2, doParallel, pscl
Maintained Yes

Download


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Versioning


No version available

Maintainer


  • person_outline Yue Hu

Publication for SCeQTL

SCeQTL institution(s)
MOE Key Laboratory of Bioinformatics and Bioinformatics Division, BNRIST, Center for Synthetic and Systems Biology, Department of Automation, Tsinghua University, Beijing, China; School of Life Sciences, Tsinghua University, Beijing, China
SCeQTL funding source(s)
Supported in part by the National Key R&D Program of China grant 2018YFC0910401, and the NSFC grant 61721003 by the CZI HCA pilot project.

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