scID specifications


Unique identifier OMICS_32957
Name scID
Alternative name single cell IDentification
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A TPM-normalised gene expression matrix and a list of genes that describes the population of interest.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Medium
Version 1.0.0
Stability Stable
Maintained Yes



Add your version


  • person_outline Katerina Boufea <>
  • person_outline Nizar Batada <>

Publication for single cell IDentification

scID institution(s)
Institute for Genetics and Molecular Medicine, University of Edinburgh, Edinburgh, UK
scID funding source(s)
Supported by the Chancellor's Fellowship from the University of Edinburgh.

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