Scipion specifications

Information


Unique identifier OMICS_14119
Name Scipion
Software type Framework/Library
Interface Graphical user interface
Restrictions to use None
Input data Some CTF, coordinates, micrographs or particles.
Input format CTFPARAM, LOG, TXT, OUT, LOG, BOX, JSON, POS, STAR, EMX, SCIPION, XMIPP
Output data The 3D models of macromolecular complexes.
Operating system Unix/Linux
Programming languages C++, Java, Javascript, Python
License GNU General Public License version 3.0
Computer skills Medium
Version 1.2.1
Stability Stable
Requirements OpenJDK, libopenmpi-dev, openmpi-bin, gfortran
Maintained Yes

Subtool


  • LocalDeblur

Download


Versioning


Add your version

Documentation


Maintainer


  • person_outline Jose Miguel de la Rosa-Trevín <>

Additional information


https://github.com/I2PC/scipion/wiki

Information


Unique identifier OMICS_14119
Name Scipion
Interface Web user interface
Restrictions to use None
Programming languages C++, Python
License GNU General Public License version 3.0
Computer skills Basic
Stability Stable
Maintained Yes

Subtool


  • LocalDeblur

Documentation


Maintainer


  • person_outline Jose Miguel de la Rosa-Trevín <>

Additional information


https://github.com/I2PC/scipion/wiki

Publications for Scipion

Scipion institution(s)
Centro Nacional de Biotecnologıa (CNB-CSIC), Cantoblanco, Madrid, Spain
Scipion funding source(s)
Supported by the Spanish Ministry of Economy and Competitiveness through grants AIC-A011-0638 and BIO2016-76400-R, Fundacion General CSIC (Programa ComFuturo), the European Union (EU), the Horizon 2020 through grants: EINFRA2014-2: EGI Engage (Proposal: 654142) and EINFRA-2015-1:West-Life (Proposal: 675858) and NVIDIA.

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