SciRoKo specifications


Unique identifier OMICS_00113
Name SciRoKo
Alternative name SSR Classification and Investigation by Robert Kofler
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages C#
License Mozilla Public License version 2.0
Computer skills Medium
Version 3.4
Stability Stable
Maintained Yes


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  • person_outline Robert Kofler <>

SciRoKo article

SciRoKo citation

PMCID: 3353346

[…] on the technology used (metzker 2010). these bases are part of random reads that will be assembled to longer contiguous sequences, or contigs. software like msatfinder (thurston and field 2006), sciroko (kofler et al. 2007), msatcommander (faircloth 2008), and iqdd (meglécz et al. 2010) allow for rapid screening of all contigs and will typically result in the discovery of several thousand […]

SciRoKo institution(s)
University of Natural Resources and Applied Life Sciences, Department for Agrobiotechnology IFA-Tulln, Institute of Biotechnology in Plant Production, Tulln, Austria; Institut für Ökologie, Universität Innsbruck, Innsbruck, Austria; Institut für Tierzucht and Genetik, Veterinärmedizinische Universitat Wien, Wien, Austria
SciRoKo funding source(s)
The Austrian Science Fund (FWF, No P18414-B14); the Fonds zur Förderung der wissenschaftlichen Forschung (FWF)

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