Scoary specifications

Unique identifier:
OMICS_13120
Interface:
Command line interface, Graphical user interface
Input data:
Scoary requires two input files: The gene_presence_absence.csv file from Roary and a list of traits to test associations to.
Output data:
Scory outputs a single csv file per trait in the traits file. The results consists of genes that were found to be associated with the trait, sorted according to significance.
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Version:
1.6.3
Requirements:
Roary, SciPy
Maintained:
Yes
Software type:
Package/Module
Restrictions to use:
None
Input format:
CSV
Output format:
CSV
Programming languages:
Python
Computer skills:
Advanced
Stability:
Stable
Source code URL:
https://codeload.github.com/AdmiralenOla/Scoary/zip/master

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Scoary distribution

download

Scoary support

Documentation

Maintainer

  • Ola Brynildsrud <>

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