SCORER specifications

Information


Unique identifier OMICS_07847
Name SCORER
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages R
Computer skills Advanced
Version 2.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Thomas L. Vincent <>

Information


Unique identifier OMICS_07847
Name SCORER
Interface Web user interface
Restrictions to use None
Programming languages R
Computer skills Basic
Version 2.0
Stability Stable
Maintained Yes

Maintainer


  • person_outline Thomas L. Vincent <>

Publications for SCORER

SCORER in publications

 (2)
PMCID: 4424349
PMID: 25802338
DOI: 10.1074/jbc.M115.637694

[…] tree construction was performed using clc sequence viewer 6, using the neighbor joining method () and 100 replicates for bootstrap analysis. coiled-coil prediction was performed using marcoil and scorer 2.0 (, ). a structural model of pfmlc-b calmodulin (cam)-like domain (amino acids 508–645) was constructed using phyre 2 protein fold recognition server (). amino acids 508–645 were modeled […]

PMCID: 3368898
PMID: 22701585
DOI: 10.1371/journal.pone.0037872

[…] where residues in the x positions are often charged. on account of the coiled-coil predictions we will refer to the low-complexity region between pfn and col as the pcoil domain. the multicoil and scorer 2.0 prediction algorithms favour a trimeric rather than dimeric coiled-coil structure for pcoil. secondary structure prediction by jpred3 suggests that the pfn domain has mainly a β-sheet […]


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SCORER institution(s)
School of Chemistry, University of Bristol, Bristol, UK

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