scploid specifications


Unique identifier OMICS_24577
Name scploid
Alternative name Single Cell RNA-seq Aneuploidy Caller
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.9
Stability Stable
Requirements devtools
Maintained Yes


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  • person_outline John C. Marioni <>
  • person_outline Jonathan Griffiths <>

Publication for Single Cell RNA-seq Aneuploidy Caller

scploid institution(s)
Cancer Research UK Cambridge Institute, University of Cambridge, Cambridge, UK; EMBL-European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Cambridge, UK; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Cambridge, UK
scploid funding source(s)
Supported by Wellcome Trust Grant “Systematic Identification of Lineage Specification in Murine Gastrulation” (109081/Z/15/A); by Wellcome Trust Grant “Tracing early mammalian lineage decisions by single cell genomics” (105031/B/14/Z); by core funding from Cancer Research UK (award no. A17197) and by core funding from EMBL.

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