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scrm specifications

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Unique identifier OMICS_07231
Name scrm
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 1.3.2
Stability Stable
Maintained Yes

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Publication for scrm

scrm citation

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Fine Scale Recombination Maps of Fungal Plant Pathogens Reveal Dynamic Recombination Landscapes and Intragenic Hotspots

2017
PMCID: 5844332
PMID: 29263029
DOI: 10.1534/genetics.117.300502

[…] from were retrieved and processed using the genometools package to add intron annotations (). the resulting gene annotations were analyzed in r together with recombination maps ()., we used the scrm coalescent simulator () to simulate polymorphism data with a constant mutation rate but variable recombination rate. recombination rates were drawn randomly from an exponential distribution […]


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scrm institution(s)
Department of Biology, Ludwig-Maximilians-Universität München, Planegg-Martinsried, Germany; Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK

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