SCScore specifications

Information


Unique identifier OMICS_26543
Name SCScore
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
License MIT License
Computer skills Advanced
Stability Stable
Requirements
RDKit, numpy
Maintained Yes

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Maintainers


  • person_outline William Green <>
  • person_outline Klavs Jensen <>

Publication for SCScore

SCScore in publications

 (2)
PMCID: 3834833
PMID: 23980029
DOI: 10.1093/nar/gkt765

[…] and r192), as previously defined (). the resulting gu docking poses were then clustered using a cutoff of 10 å inter-atomic distance, and for each cluster, the gu docking pose with the best ftdock scscore was selected as representative. all possible combinations of up to 12 consecutive dinucleotide docking poses were calculated using a graph-like algorithm, allowing “gaps” that would represent […]

PMCID: 3409163
PMID: 22860071
DOI: 10.1371/journal.pone.0042161

[…] cells (memory b lymphocytes, t lymphocytes, polymorphonuclear cells, monocytes, osteoclasts). these 37 genes shared by mmcs and adult or pluripotent stem cells were used to build a stem cell score (scscore), which proved to be strongly prognostic in the 2 independent cohorts of patients compared to other gene expression-based risk scores or usual clinical scores using multivariate cox analysis. […]


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SCScore institution(s)
Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
SCScore funding source(s)
Supported by the DARPA Make-It program under contract ARO W911NF-16-2-0023 and the NSF Graduate Research Fellowship Program under Grant No. 1122374.

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