SCWRL specifications

Information


Unique identifier OMICS_15563
Name SCWRL
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input data A protein backbone, with or without sidechains, cofactors, or solvent.
Input format PDB
Output data Backbone with predicted coordinates for the sidechains.
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Version 4.0
Stability Stable
Maintained Yes

Versioning


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Maintainer


  • person_outline Roland Dunbrack Jr <>

SCWRL articles

SCWRL citation

2017
PMCID: 5698706

[…] 4azu pdb file was used as a model of the azurin structure and the coordinates of each of the four chains were extracted.4 mutations were created by replacing specific amino acid sidechains using the scwrl 4.0 algorithm to find the optimum position of the side chain.35 the pdb2pqr software package was used to add hydrogen atoms to the structure, refine hydrogen bonds and assign partial charges […]

SCWRL institution(s)
Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, PA, USA; Moscow Engineering Physics Institute (MEPHI), Moscow, Russia
SCWRL funding source(s)
This work was funded by NIH grants R01 HG02302, R01 GM84453, and P20 GM76222.

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