SDOCK specifications

Information


Unique identifier OMICS_16982
Name SDOCK
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
Computer skills Advanced
Stability Stable
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

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Publication for SDOCK

SDOCK citation

library_books

Small Molecules Targeted to a Non Catalytic “RVxF” Binding Site of Protein Phosphatase 1 Inhibit HIV 1

2012
PLoS One
PMCID: 3387161
PMID: 22768081
DOI: 10.1371/journal.pone.0039481

[…] Coordinates of the receptor molecule, PP1, were processed with pdb2mm module of the QXP package. Binding site was defined as PP1 residues within the sphere of 1.2 nm with center as CG atom of Leu243. Sdock routine of QXP docking engine was employed at 100 steps per ligand and 5 conformations per complex were saved. […]

SDOCK institution(s)
Beijing National Laboratory for Molecular Sciences, State Key Laboratory for Structural Chemistry of Unstable, Beijing, China; Stable Species, College of Chemistry and Molecular engineering, Peking University, Beijing, China; Center for Theoretical Biology, Peking University, Beijing, China

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