SDRF2GRAPH specifications


Unique identifier OMICS_22601
Interface Web user interface
Restrictions to use None
Input data Some SDRF spreadsheets.
Input format XLS
Output data A graph of the experiment.
Programming languages Ruby
Computer skills Basic
Version 1.0
Stability Stable
Maintained Yes


  • person_outline Yoshihide Hayashizaki
  • person_outline Hideya Kawaji
  • person_outline Carsten Daub

Publication for SDRF2GRAPH

SDRF2GRAPH citation


Update of the FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation

Nucleic Acids Res
PMCID: 3013704
PMID: 21075797
DOI: 10.1093/nar/gkq1112

[…] F is proposed as a part of MAGE-tab () employed by ArrayExpress (), and now employed by ISA-tab () covering more wide range of omics data. A graphical representation of the meta-data is available via SDRF2GRAPH () to facilitate the understanding of the complex details, in particular, the relationship between samples and data sets.The entire set of meta-data is useful to understand the whole experi […]

SDRF2GRAPH institution(s)
RIKEN Omics Science Center, RIKEN Yokohama Institute, Yokohama, Japan
SDRF2GRAPH funding source(s)
Supported by a grant of the Genome Network Project from the Ministry of Education, Culture, Sports, Science and Technology, Japan.

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