SeAMotE specifications

Information


Unique identifier OMICS_06265
Name SeAMotE
Alternative name Sequence Analysis of Motifs Enrichment
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Gian Gaetano Tartaglia

Publication for Sequence Analysis of Motifs Enrichment

SeAMotE citation

library_books

Advances in the characterization of RNA‚Äźbinding proteins

2016
PMCID: 5113702
PMID: 27503141
DOI: 10.1002/wrna.1378

[…] A large number of computational methods address the problem of characterizing RNA partners of specific RBPs. MEME, RBPmap, SeAMotE, and RNAcontext identify motifs enriched in RNA targets. The use of sequence motifs allows discovery of targets in RNA datasets, but ab initio predictions of RNA interactions are not possible […]

SeAMotE institution(s)
Gene Function and Evolution, Centre for Genomic Regulation (CRG), C/, Barcelona, Spain

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