SecretomeP pipeline

SecretomeP specifications

Information


Unique identifier OMICS_03893
Name SecretomeP
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Soren Bruk <>

Publication for SecretomeP

SecretomeP citations

 (2)
2017
PMCID: 5361795

[…] [pacheco et al. [57], silva et al. [58], bidentified in an isolated of c. pseudotuberculosis from ovine lymph nodes [rees et al. [12], the proteins identified in both conditions were analyzed by secretomep [29] to assess whether these proteins could be exported by non-classical secretion systems. among the expressed differentially proteins 31% (37 proteins) were predicted as secreted […]

2011
PMCID: 3200161

[…] and mit) and the central aspergillus data repository (strain cbs 513.88) http://www.cadre-genomes.org.uk/index.html[50]., signalp 3.0 [51] (both neural networks and markov models methods were used), secretomep 2.0 (mammalian option was used) [52] and tmhmm 2.0 [53] from cbs prediction servers were used to predict the subcellular localization of a. niger mcos. amino acid sequences were aligned […]

SecretomeP institution(s)
Center for Biological Sequence Analysis, BioCentrum-DTU, Technical University of Denmark, Lyngby, Denmark

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