SEEKR statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

Tool usage distribution map
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Associated diseases

Associated diseases

SEEKR specifications

Information


Unique identifier OMICS_31869
Name SEEKR
Alternative name Sequence Evaluation from K-mer Representation
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Mauro Calabrese <>

Additional information


https://github.com/CalabreseLab/seekr

Publication for Sequence Evaluation from K-mer Representation

SEEKR institution(s)
Department of Pharmacology and Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Curriculum in Bioinformatics and Computational Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Chemistry, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Curriculum in Genetics and Molecular Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Curriculum in Pharmacology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Computer Science, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Carolina Center for Interdisciplinary Applied Mathematics, Department of Mathematics, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA
SEEKR funding source(s)
Supported by National Institutes of Health (NIH) Grants UL1TR002489, GM121806, and GM105785, Basil O’Connor Award no. 5100683 from the March of Dimes Foundation, the Eshelman Institute for Innovation, the Lineberger Comprehensive Cancer Center, the UNC Department of Pharmacology, the James S. McDonnell Foundation 21st Century Science Initiative-Complex Systems Scholar Award Grant no. 220020315, NIH MIRA award R35 GM122532, an NSF Graduate Research Fellow (Grant DGE-1650116), an NIH training grant in bioinformatics and computational biology (T32 GM067553), an NIH training grant in genetics and molecular biology (T32 GM007092), an NSF Graduate Research Fellow (Grant DGE-1144081), and an NIH training grant in molecular and cellular biophysics (Grant T32 GM08570).

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