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SeMeta specifications

Information


Unique identifier OMICS_10972
Name SeMeta
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data SeMeta supports both single-end and paired-end reads.
Operating system Unix/Linux
Programming languages C++
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Hoai Van Tran <>

Publication for SeMeta

SeMeta in publications

 (2)
PMCID: 5622064
PMID: 28963451
DOI: 10.1038/s41467-017-00556-x

[…] mary statistics with us. an example configuration file can be found in the supplementary note ., we ran fixed effects meta-analysis as described by raremetal. we directly computed the meta β meta and semeta for a given cnv probe from the summary statistics from the multiple cohorts:\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usep […]

PMCID: 3441677
PMID: 23028791
DOI: 10.1371/journal.pone.0045112

[…] shown are the nominal numbers of snps in the set for each locus., “dof” indicates the effective degrees of freedom for each locus, which is the correction factor used to adjust p-values., βmeta and semeta refer to the estimates from the meta-analysis combined across the three strata of local ancestry., given that the 8.8% of the phenotypic variance explained in our sample was considerably […]


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SeMeta institution(s)
Faculty of Computer Science and Engineering, HCMC University of Technology, HCM City, Vietnam; Institute of Applied Mechanics and Informatics, Vietnam Academy of Science and Technology, HCM City, Vietnam; Faculty of Information Technology, Lac Hong University, Bien Hoa, Dong Nai, Vietnam; Faculty of Information Technology, HCMC University of Technology and Education, HCM City, Vietnam
SeMeta funding source(s)
This research was funded by HCMC Department of Science and Technology, under contract number 39/2015/HÐ-SKHCN.

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