Seq-ImmuCC specifications

Information


Unique identifier OMICS_30786
Name Seq-ImmuCC
Alternative name ImmuCC
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Taxon


  • Rodents
    • Mus musculus

Maintainers


  • person_outline Frank Xiaofeng Qin
  • person_outline Aiping Wu

Publication for Seq-ImmuCC

Seq-ImmuCC citations

 (2)
library_books

Common genes associated with antidepressant response in mouse and man identify key role of glucocorticoid receptor sensitivity

2017
PLoS Biol
PMCID: 5746203
PMID: 29283992
DOI: 10.1371/journal.pbio.2002690

[…] r treatment responders were related to changes in blood cell proportions in the mice using CIBERSORT []. The input reference matrix of expression signature profiles of mouse tissue was obtained using ImmuCC []. These statistical tools infer proportions of 25 types of immune blood cell types. […]

library_books

Inference of immune cell composition on the expression profiles of mouse tissue

2017
Sci Rep
PMCID: 5233994
PMID: 28084418
DOI: 10.1038/srep40508

[…] Six major steps were included in the methodological framework of ImmuCC (). First, raw microarray data were collected from public databases and preprocessed to keep 25 immune cell types in the model (). Second, significant differentially expressed genes for each im […]

Seq-ImmuCC institution(s)
Center for Systems Medicine, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China; Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, China; School of Life Science and Technology, China Pharmaceutical University, Nanjing, China; School of Pharmacy, Health Science Center, Xi’an Jiaotong University, Xi’an, China
Seq-ImmuCC funding source(s)
Supported by National Key Plan for Scientific Research and Development of China (2016YFD0500300), the CAMS Initiative for Innovative Medicine (CAMS-I2M, 2016-I2M-1-005), the National Natural Science Foundation of China (31470273, 81773058); Six-talent peaks project in Jiangsu Province (SWYY-169) and Jiangsu Provincial Natural Science Foundation (BK20141065).

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