SEQMIX statistics

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Citations per year

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Popular tool citations

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Tool usage distribution map

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Associated diseases

Associated diseases

SEQMIX specifications

Information


Unique identifier OMICS_09426
Name SEQMIX
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data SEQMIX outputs the posterior distribution of ancestry at each position.
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Version 0.1
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Gonçalo Abecasis <>

Publication for SEQMIX

SEQMIX in publication

PMCID: 4586512
PMID: 26483834
DOI: 10.3389/fgene.2015.00292

[…] (sankararaman et al., ); on reference haplotypes for each of the ancestral populations from high-density snps such as hapmix (price et al., ) and lamp-ld (baran et al., ); or sequence data such as seqmix (hu et al., ) and ngsadmix (hu et al., )., global ancestry is estimated as the proportion (percentage) of ancestral blocks from each contributing population across the markers of interest. […]


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SEQMIX institution(s)
Department of Integrative Biology, University of California Berkeley, Berkeley, CA, USA; Center for Statistical Genetics, Department of Biostatistics, University of Michigan, School of Public Health, Ann Arbor, MI, USA; Department of Human Genetics, University of Michigan, School of Public Health, Ann Arbor, MI, USA

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