SeqSpider specifications

Information


Unique identifier OMICS_16313
Name SeqSpider
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Perl
Computer skills Advanced
Version 1.01
Stability Stable
Maintained Yes

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Versioning


No version available

Maintainer


  • person_outline Jing-Dong Han

Publication for SeqSpider

SeqSpider citation

library_books

Stability Indicators in Network Reconstruction

2014
PLoS One
PMCID: 3937450
PMID: 24587057
DOI: 10.1371/journal.pone.0089815

[…] recent comparative reviews). Solutions range from general purpose algorithms (such as correlation or relevance networks ) to methods tailored ad hoc for specific data types. Recent examples include SeqSpider for Next Generation Sequencing data, or Sparsity-aware Maximum Likelihood for cis-expression quantitative trait loci (cis-eQTL).However, network reconstruction is an underdetermined proble […]

SeqSpider funding source(s)
This work was supported by grants from the National Natural Science Foundation of China (30890033 and 91019019), the Ministry of Science and Technology of China (2011CB504206) and Chinese Academy of Sciences (KSCX2-EW-R-02, KSCX2-EWJ-15 and XDA01010303), and from Beijing Jiaotong University (K12RC00090).

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