Protein sequence comparison analysis | Proteomics

Protein comparison analysis steps

Protein sequence comparison analysis | Proteomics

Most Recent Tools

SuiteMSA
Desktop

SuiteMSA Suite of Multiple Sequence Alignment

Provides researchers easy access to a sequence evolution simulator, reference…

Provides researchers easy access to a sequence evolution simulator, reference alignments generated by the simulator, and a series of tools to evaluate the performance of the multiple sequence…

3DM
Desktop

3DM

Uses to extract clues about the function of specific amino acids and predict…

Uses to extract clues about the function of specific amino acids and predict effects of mutations. 3DM is a protein superfamily knowledgebase based upon a structure-based multiple sequence alignment…

SATCHMO
Desktop

SATCHMO Simultaneous Alignment and Tree Construction using Hidden Markov mOdels

Constructs simultaneously a tree and a set of multiple sequence alignments, one…

Constructs simultaneously a tree and a set of multiple sequence alignments, one for each internal node of the tree. SATCHMO generates profile hidden Markov models (HMM) at each node; these are used…

CASA
Web

CASA

Evaluates the accuracy of protein sequence alignment methods. CASA is an…

Evaluates the accuracy of protein sequence alignment methods. CASA is an implementation of the alignment accuracy benchmark. The server produces graphical and tabular comparisons of the accuracy of a…

Most Popular Tools

TnT
Library

TnT

A set of libraries aimed at creating powerful tree- and track-based…

A set of libraries aimed at creating powerful tree- and track-based visualisations for the web. Its modularity and rich API facilitate the development of many different visualisations ranging from…

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