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Protein sequence comparison analysis | Proteomics

Protein comparison analysis steps

Experts in Protein comparison analysis

They share and annotate bioinformatics tools

Most recent bioinformatics tools

PeCoP
Web

PeCoP

Assists in finding persistently conserved positions. PeCoP is a web application…

Assists in finding persistently conserved positions. PeCoP is a web application that constructs profiles from close and distant sequence family members. It uses PSI-BLAST runs over the NCBI…

ProtSweep
Web

ProtSweep

Allows analysis and identification of protein sequences. ProtSweep consists in…

Allows analysis and identification of protein sequences. ProtSweep consists in an approach to the functional characterization of unknown proteins based on a cascade of similarity searches. Proteins…

PRODOC
Web

PRODOC PROtein Domain Organization and Comparison

Simplifies search for a given sequence of domains in various genomes,…

Simplifies search for a given sequence of domains in various genomes, identification of domain fusion events, recognition of gene products with identical or similar domain compositions. PRODOC…

EuPathDomains
Dataset

EuPathDomains

Provides known and new protein domains identified by Co-Occurrence Domain…

Provides known and new protein domains identified by Co-Occurrence Domain Detection (CODD) on several major human pathogens selected from EupathDB database. EuPathDomains can be queried by protein…

Most popular analytical software and databases

BLAST
Web

BLAST Basic Local Alignment Search Tool

Allows to align query sequences against those present in a selected target…

Allows to align query sequences against those present in a selected target database. BLAST is a suite of programs, provided by NCBI, which can be used to quickly search a sequence database for…

TnT
Desktop

TnT

A set of libraries aimed at creating powerful tree- and track-based…

A set of libraries aimed at creating powerful tree- and track-based visualisations for the web. Its modularity and rich API facilitate the development of many different visualisations ranging from…

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