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Sequence Alignment/Map format SAM format

A generic alignment format for storing read alignments against reference sequences, supporting short and long reads (up to 128 Mbp) produced by different sequencing platforms.

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SAM format classification

SAM format specifications

SAM format support

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Publications

Institution(s)

Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, CambridgeA, UK, Broad Institute of MIT and Harvard, Cambridge, MA, USA

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