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Sexual reproduction software tools and databases

Sexual reproduction in eukaryotes involves a wide spectrum of biological processes by which species give rise to new individuals and thus perpetuate. These include the formation of haploid gametes after meiosis, a specific type of cell division that…
GED
Dataset

GED Gametogenesis Epigenetic modification Database

A comprehensive resource of epigenetic modification of gametogenesis. Users can…

A comprehensive resource of epigenetic modification of gametogenesis. Users can get the information about epigenetic modifications (DNA methylation, histone modification and miRNA regulation) and the…

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GermSAGE
Dataset

GermSAGE

A collection of male germ cell transcriptiome information derived from Serial…

A collection of male germ cell transcriptiome information derived from Serial Analysis of Gene Expression (SAGE). GermSAGE includes the three key germ cell stages in spermatogenesis, including mouse…

RGV
Web

RGV ReproGenomics Viewer

A cross-species genomic toolbox for the reproductive community. The system is…

A cross-species genomic toolbox for the reproductive community. The system is based on the implementation of a JBrowse genome browser and a Galaxy bioinformatics workflow environment. It was…

GermOnline
Dataset

GermOnline

A cross-species database portal focusing on high-throughput expression data…

A cross-species database portal focusing on high-throughput expression data relevant for germline development, the meiotic cell cycle and mitosis in healthy versus malignant cells. The GermOnline…

Spermatogenesis…
Dataset

SpermatogenesisOnline

Provides a comprehensive platform to gather detailed information of…

Provides a comprehensive platform to gather detailed information of experimentally verified and Greed AUC Stepwise (GAS)-predicted genes in spermatogenesis. SpermatogenesisOnline integrates the…

OKdb
Dataset

OKdb Ovarian Kaleidoscope Database

Provides information regarding the biological function, expression pattern and…

Provides information regarding the biological function, expression pattern and regulation of genes expressed in the ovary. OKdb also contains information on gene sequences, chromosomal localization,…

SpPress
Dataset

SpPress Drosophila Spermatogenesis Expression Database

A public database containing genome-wide expression analysis of wild-type males…

A public database containing genome-wide expression analysis of wild-type males using three cell populations isolated from mitotic, meiotic and post-meiotic phases of spermatogenesis in D.…

Follicle Online
Dataset

Follicle Online

A web-based database system for storing and retrieving folliculogenesis-related…

A web-based database system for storing and retrieving folliculogenesis-related experimental data. It provides detailed information for 580 genes/proteins (from 23 model organisms, including Homo…

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GUDMAP
Dataset

GUDMAP GenitoUrinary Development Molecular Anatomy Project

An international consortium working to generate gene expression data and…

An international consortium working to generate gene expression data and transgenic mice. GUDMAP includes data from large-scale in situ hybridisation screens (wholemount and section) and microarray…

Phendo
Mobile

Phendo

Establishes a catalog of the signs and symptoms of endometriosis as experienced…

Establishes a catalog of the signs and symptoms of endometriosis as experienced by users, people with endometriosis. Phendo provides opportunities to reflect upon the collected data and may help…

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GermlncRNA
Dataset

GermlncRNA

Provides the first comprehensive web-based and open-access lncRNA catalogue for…

Provides the first comprehensive web-based and open-access lncRNA catalogue for three key male germ cell stages, including type A spermatogonia, pachytene spermatocytes and round spermatids. This…

MeioBase
Dataset

MeioBase

Provides information related to meiosis such as tools for search, comparison…

Provides information related to meiosis such as tools for search, comparison and analysis. MeioBase offers access to various kinds of information related to meiosis. It contains a collection of links…

GonadSAGE
Dataset

GonadSAGE

A publicly available web-based SAGE database on male gonad development that…

A publicly available web-based SAGE database on male gonad development that covers six male mouse embryonic gonad stages, including E10.5, E11.5, E12.5, E13.5, E15.5 and E17.5. The sequence coverage…

ReCGiP
Dataset

ReCGiP

A database providing candidate genes for reproductive researches in pig by…

A database providing candidate genes for reproductive researches in pig by mining and processing existing biological literatures in human and pigs. Based on text-mining and comparative genomics,…

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