SFMetaDB specifications


Unique identifier OMICS_20401
Name SFMetaDB
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes


  • person_outline Peng Yu

Additional information


Publication for SFMetaDB

SFMetaDB citation


GEOMetaCuration: a web based application for accurate manual curation of Gene Expression Omnibus metadata

PMCID: 5868185
PMID: 29688376
DOI: 10.1093/database/bay019

[…] problem in NLP (), such as determining the key factors being perturbed in a dataset. Manually curating these metadata is essential. Indeed, a number of metadata resources, such as RNASeqMetaDB () and SFMetaDB (), have been created using manual curation with high accuracy.However, manual metadata curation is time-consuming. General-purpose applications, such as Google Drive, have been used to facil […]

SFMetaDB institution(s)
Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA; TEES-AgriLife Center for Bioinformatics and Genomic Systems Engineering, Texas A&M University, College Station, TX, USA; Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan; Institute of Genetics and Biophysics “Adriano Buzzati Traverso”, CNR, Naples, Italy; Department of Science and Technology, University of Naples “Parthenope”, Naples, Italy; Department of Molecular Genetics and Microbiology, Center for NeuroGenetics, the Genetics Institute, and the Genetics & Genomics Graduate Program, University of Florida, College of Medicine, Gainesville, FL, USA
SFMetaDB funding source(s)
Supported by startup funding from the ECE department and Texas A&M Engineering Experiment Station/Dwight Look College of Engineering at Texas A&M University and by funding from TEES-AgriLife Center for Bioinformatics and Genomic Systems Engineering (CBGSE) at Texas A&M University, by TEES seed grant, by Texas A&M University-CAPES Research Grant Program and by grants from the NIH (NS058901, NS098819).

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