Sfold protocols

Sfold specifications


Unique identifier OMICS_03468
Name Sfold
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Ye Ding <>

Publication for Sfold

Sfold IN pipeline

PMCID: 3063221
PMID: 21388531
DOI: 10.1186/1748-7188-6-3

[…] of all intervals of an rna molecule in (n3) time and (n2) memory. this is the same complexity as the algorithm to compute the partition function, which is underlying the sampling approaches, like sfold [11], commonly used for this task. however, the probabilities to be accessible for different intervals are not independent. therefore, if one is interested in more complex questions, e.g. […]

Sfold institution(s)
Bioinformatics Center, Wadsworth Center, New York State Department of Health, Albany, NY, USA

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