sgRNA Scorer specifications

Unique identifier:
OMICS_15503
Restrictions to use:
None
Input format:
FASTA
Programming languages:
Python
Version:
2.0
Maintained:
Yes
Interface:
Web user interface
Input data:
The genomic sequence, user's email address, the CRISPR system, the spacer length, the PAM sequence and orientation.
Output data:
The guide RNA sequences and scores.
Computer skills:
Basic
Stability:
Stable

sgRNA Scorer specifications

Unique identifier:
OMICS_15503
Interface:
Command line interface
Input data:
The genomic sequence.
Output data:
The guide RNA sequences and scores.
Programming languages:
Python
Version:
2.0
Requirements:
BioPython, Sci-kit learn
Software type:
Application/Script
Restrictions to use:
None
Input format:
FASTA
Operating system:
Unix/Linux, Mac OS
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

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sgRNA Scorer distribution

download

sgRNA Scorer support

Documentation

Maintainer

  • Raj Chari <>
  • Raj Chari <>

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Credits

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Publications

Institution(s)

Department of Genetics, Harvard Medical School, Boston, MA, USA; Wyss Institute for Biologically Inspired Engineering, Harvard University, Cambridge, MA, USA

Funding source(s)

This work was supported by NIH grant P50 HG005550.

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