SHARAKU specifications


Unique identifier OMICS_14789
Name SHape Aligner of non-coding RNA developed by Keio University
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Requirements Boost C++, Perl, BEDTools, dafs-sharaku
Maintained Yes


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  • person_outline Yasubumi Sakakibara <>

SHARAKU article

SHARAKU institution(s)
Department of Biosciences and Informatics, Keio University, Yokohama, Japan
SHARAKU funding source(s)
This work was supported by a Grant-in-Aid for Scientific Research in Innovative Areas [No. 221S0002] from the Ministry of Education, Culture, Sports, Science and Technology of Japan (MEXT), and a Grant-in-Aid for Scientific Research (A) (KAKENHI) [No. 23241066] from the JSPS, and supported by a Grant-in-Aid for Scientific Research (C) (KAKENHI) [No. 25330348] from the JSPS; by a MEXT-supported Program for the Strategic Research Foundation at Private Universities, and a grant from the Strategic Research Program for Brain Sciences from the Japan Agency for Medical Research and Development (AMED) of Japan.

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