ShinyNGS statistics

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Citations per year

Citations chart

Popular tool citations

chevron_left Gene expression visualization chevron_right
Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

ShinyNGS specifications


Unique identifier OMICS_19134
Name ShinyNGS
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R, CSS
License GNU Affero General Public License version 3, MIT License
Computer skills Medium
Version 0.0.1
Stability Beta
GenomicRanges, SummarizedExperiment, shiny, bioc, shinyngs
Source code URL
Maintained Yes



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ShinyNGS in publication

PMCID: 5240446
PMID: 28093077
DOI: 10.1186/s13059-016-1135-5

[…] to analyze gene expression datasets. degust can produce a principal component analysis visualization, clustering aspects of a user’s dataset. jonathan manning (university of edinburgh) presented shinyngs (, an r package for generating plots from rna-seq data. birgit meldal (european bioinformatics institute, uk) described the complex portal […]

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