SHIVA specifications

Information


Unique identifier OMICS_12697
Name SHIVA
Interface Web user interface
Restrictions to use None
Input data RNA sequence(s)
Input format Fasta
Programming languages Java, R
License GNU Lesser General Public License version 3.0
Computer skills Basic
Stability Stable
Requirements
Javascript
Maintained Yes

Maintainer


  • person_outline Dominik Heider <>

Publication for SHIVA

SHIVA in publication

PMCID: 5558779
PMID: 28810826
DOI: 10.1186/s12859-017-1782-x

[…] (tdf), efavirenz (efv), etravirine (etr), nevirapine (nvp), rilpivirine (rpv). applying cut-offs, we obtain a classification output from our ann models which is then evaluated against hivdb and shiva []. our work resulted in the production of drug-specific regression anns with high mean r2 values, low variance and competitive classification performances for each of the eight pr inhibitors […]


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SHIVA institution(s)
Department of Bioinformatics, Straubing Center of Science, Straubing, Germany; University of Applied Science Weihenstephan-Triesdorf, Freising, Germany
SHIVA funding source(s)
This work was supported by the German Research Foundation (DFG) and the Technische Universit√§t M√ľnchen within the funding programme Open Access Publishing.

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