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SHOGoiN specifications

Information


Unique identifier OMICS_05628
Name SHOGoiN
Alternative names SHOGoiN Cell Database, CELLPEDIA
Restrictions to use None
Database management system MySQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Taxon


  • Primates
    • Homo sapiens

Maintainer


  • person_outline Wataru Fujibuchi

Publications for SHOGoiN

SHOGoiN citation

library_books

Cell type discovery and representation in the era of high content single cell phenotyping

2017
BMC Bioinformatics
PMCID: 5763450
PMID: 29322913
DOI: 10.1186/s12859-017-1977-1

[…] anch alone.The CL is used as a reference annotation vocabulary for a number of research projects and database resources, including the ENCODE [] and FANTOM5 (e.g. []) projects, and the ImmPort [] and SHOGoiN/CELLPEDIA [] databases. Perhaps more importantly, a software package, flowCL, has recently been developed that allows for the automated mapping of cell populations identified from high-dimensi […]


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SHOGoiN institution(s)
Center for iPS Cell Research and Application, Kyoto University, Shogoin, Sakyoku, Kyoto, Japan; Charite Universitatsmedizin Berlin, Berlin-Brandenburg Center for Regenerative Therapies, Berlin, Germany; National Institute for Biological Standards and Control, an Operating Centre of the Medicines and Healthcare Products Regulatory Agency, South Mimms, UK; Department of Genetics and Human Genetics Institute of New Jersey, Rutgers, The State University of New Jersey, Piscataway, NJ, USA
SHOGoiN funding source(s)
Supported in part by a grant from Core Center for iPS Cell Research, Research Center Network for Realization of Regenerative Medicine, Japan Agency for Medical Research and Development; a grant from Research on Regenerative Medicine for Clinical Application; Health and Labor Sciences Research Grants from the Ministry of Health, Labour and Welfare, Japan; the U.K. Stem Cell Bank Phase IV grant from the Medical Research Council and Biotechnology and Biological Sciences Research Council; National Institute of Mental Health Grant 5U24MH068457-13; and National Institute of Neurological Disorders and Stroke Grant 1U24NS095914-01.

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